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136
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BIOINFORMATICS
2008
135views more  BIOINFORMATICS 2008»
15 years 3 months ago
Message-passing algorithms for the prediction of protein domain interactions from protein-protein interaction data
Motivation: Cellular processes often hinge upon specific interactions among proteins, and knowledge of these processes at a system level constitutes a major goal of proteomics. In...
Mudassar Iqbal, Alex Alves Freitas, Colin G. Johns...
110
Voted
BIBE
2000
IEEE
110views Bioinformatics» more  BIBE 2000»
15 years 7 months ago
FURY: Fuzzy Unification and Resolution Based on Edit Distance
We present a theoretically founded framework for fuzzy unification and resolution based on edit distance over trees. Our framework extends classical unification and resolution con...
David Gilbert, Michael Schroeder
86
Voted
BIOINFORMATICS
2008
106views more  BIOINFORMATICS 2008»
15 years 3 months ago
Interactive visualization software for exploring phylogenetic trees and clades
The Summary Tree Explorer (STE) is a Java application for interactively exploring sets of phylogenetic trees using two coupled representations: a node-and-link diagram and a textu...
Mark Derthick
273
Voted
PADL
2009
Springer
16 years 4 months ago
Using Bloom Filters for Large Scale Gene Sequence Analysis in Haskell
Analysis of biological data often involves large data sets and computationally expensive algorithms. Databases of biological data continue to grow, leading to an increasing demand ...
Ketil Malde, Bryan O'Sullivan
116
Voted
WABI
2009
Springer
200views Bioinformatics» more  WABI 2009»
15 years 10 months ago
K-Partite RNA Secondary Structures
Minghui Jiang, Pedro J. Tejada, Ramoni O. Lasisi, ...