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ISBRA
2010
Springer
15 years 12 months ago
Fast Computation of the Exact Hybridization Number of Two Phylogenetic Trees
Abstract. Hybridization is a reticulate evolutionary process. An established problem on hybridization is computing the minimum number of hybridization events, called the hybridizat...
Yufeng Wu, Jiayin Wang
ISBRA
2009
Springer
15 years 12 months ago
Querying Protein-Protein Interaction Networks
Recent techniques increase the amount of our knowledge of interactions between proteins. To filter, interpret and organize this data, many authors have provided tools for querying...
Guillaume Blin, Florian Sikora, Stéphane Vi...
BIBM
2008
IEEE
107views Bioinformatics» more  BIBM 2008»
15 years 11 months ago
Multiway Clustering for Creating Biomedical Term Sets
We present an EM-based clustering method that can be used for constructing or augmenting ontologies such as MeSH. Our algorithm simultaneously clusters verbs and nouns using both ...
Vasileios Kandylas, Lyle H. Ungar, Ted Sandler, Sh...
BIBE
2007
IEEE
108views Bioinformatics» more  BIBE 2007»
15 years 11 months ago
Using Parsimony to Guide Maximum Likelihood Searches
—The performance of maximum likelihood searches can be boosted by using the most parsimonious tree as a starting point for the search. The time spent in performing the parsimony ...
Kenneth Sundberg, Timothy O'Connor, Hyrum Carroll,...
BIBE
2007
IEEE
214views Bioinformatics» more  BIBE 2007»
15 years 11 months ago
Histogram Transformation for Inter-Modality Image Registration
Abstract—This paper describes an efficient image transformation method based on histogram information and some prior knowledge of tissue expression in different modalities for r...
Joerg Meyer