Different databases of metabolic pathways assign pathways different keys. For this reason, it is difficult to automatically compare pathways across databases. We introduce an algo...
In theory, it should be possible to infer realistic genetic networks from time series microarray data. In practice, however, network discovery has proved problematic. The three ma...
Shawn Martin, George Davidson, Elebeoba E. May, Je...
RNA structures can be viewed as a kind of special strings with some characters bonded with each other. The question of aligning two RNA structures has been studied for a while, an...
P system is a natural computing model inspired by behavior of living cells and their membranes. We show that (semi-)uniform families of P systems with active membranes can solve i...
In this paper we develop data mining techniques to predict 3D contact potentials among protein residues (or amino acids) based on the hierarchical nucleationpropagation model of p...