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BIBE
2009
IEEE
210views Bioinformatics» more  BIBE 2009»
16 years 5 days ago
Analysis of Autism Prevalence and Neurotoxins Using Combinatorial Fusion and Association Rule Mining
- The increase in autism prevalence has been the motivation for much research which has produced various theories for its causation. Genetic and environmental factors have been inv...
Christina Schweikert, Yanjun Li, David Dayya, Davi...
175
Voted
BIBM
2009
IEEE
206views Bioinformatics» more  BIBM 2009»
16 years 5 days ago
ChemAlign: Biologically Relevant Multiple Sequence Alignment Using Physicochemical Properties
—We present a new algorithm, ChemAlign, that uses physicochemical properties and secondary structure elements to create biologically relevant multiple sequence alignments (MSAs)....
Hyrum Carroll, Mark J. Clement, Quinn Snell, David...
ISBRA
2009
Springer
16 years 4 days ago
Integrating Multiple-Platform Expression Data through Gene Set Features
Abstract. We demonstrate a set-level approach to the integration of multiple platform gene expression data for predictive classification and show its utility for boosting classi...
Matej Holec, Filip Zelezný, Jirí Kl&...
154
Voted
ISBRA
2009
Springer
16 years 4 days ago
Practical Quality Assessment of Microarray Data by Simulation of Differential Gene Expression
There are many methods for assessing the quality of microarray data, but little guidance regarding what to do when defective data is identified. Depending on the scientific questio...
Brian E. Howard, Beate Sick, Steffen Heber
ISBRA
2009
Springer
16 years 4 days ago
Analysis of Cis-Regulatory Motifs in Cassette Exons by Incorporating Exon Skipping Rates
Identification of cis-regulatory motifs has long been a hotspot in the study of alternative splicing. We propose a two-step approach: we first identify k-mer seed motifs by testing...
Sihui Zhao, Jihye Kim, Steffen Heber