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BIBM
2007
IEEE
15 years 11 months ago
A Geometric Representation of Protein Sequences
The amino acid sequence of a protein is the key to understanding its structure and ultimately its function in the cell. This paper addresses the fundamental issue of encoding amin...
Shengyin Gu, Olivier Poch, Bernd Hamann, Patrice K...
BIBM
2007
IEEE
171views Bioinformatics» more  BIBM 2007»
15 years 11 months ago
GenMiner: Mining Informative Association Rules from Genomic Data
GENMINER is a smart adaptation of closed itemsets based association rules extraction to genomic data. It takes advantage of the novel NORDI discretization method and of the CLOSE ...
Ricardo Martínez, Claude Pasquier, Nicolas ...
BIBM
2007
IEEE
126views Bioinformatics» more  BIBM 2007»
15 years 11 months ago
Microarray Image Denoising Using a Two-Stage Multiresolution Technique
DNA microarrays have demonstrated an excellent potential in correlating specific gene expression profiles to specific conditions. However, they are affected by inherent noise. ...
Hara Stefanou, Thanasis Margaritis, Dimitris Kafet...
BIBM
2007
IEEE
135views Bioinformatics» more  BIBM 2007»
15 years 11 months ago
Graph Kernel-Based Learning for Gene Function Prediction from Gene Interaction Network
Prediction of gene functions is a major challenge to biologists in the post-genomic era. Interactions between genes and their products compose networks and can be used to infer ge...
Xin Li, Zhu Zhang, Hsinchun Chen, Jiexun Li
BIRD
2007
Springer
107views Bioinformatics» more  BIRD 2007»
15 years 11 months ago
Prediction of Structurally-Determined Coiled-Coil Domains with Hidden Markov Models
The coiled-coil protein domain is a widespread structural motif known to be involved in a wealth of key interactions in cells and organisms. Coiled-coil recognition and prediction ...
Piero Fariselli, Daniele Molinini, Rita Casadio, A...