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CSB
2005
IEEE
192views Bioinformatics» more  CSB 2005»
15 years 11 months ago
Operon Prediction in Cyanobacteria using Comparative Genomics
In this work, we performed a comprehensive analysis of the genome organization of eight publicly available cyanobacterial genomes and of the extensively studied Escherichia coli K...
Natalia Khuri, Nikhila S. Rao
CSB
2005
IEEE
166views Bioinformatics» more  CSB 2005»
15 years 11 months ago
Artificial Neural Networks to Predict Daylily Hybrids
Artificial Neural Networks (ANN) were employed to predict daylily (Hemerocalli spp.) hybrids from known characteristics of parents used in hybridization. Features such as height, ...
Ramana M. Gosukonda, Masoud Naghedolfeizi, Johnny ...
CSB
2005
IEEE
180views Bioinformatics» more  CSB 2005»
15 years 11 months ago
Functional Modularity in a Large-Scale Mammalian Molecular Interaction Network
The Ingenuity™ Pathways Knowledge Base (IPKB) contains over one million findings manually curated from the scientific literature. Highly-structured content from the IPKB forms...
Andreas Kramer, Daniel R. Richards, James O. Bowlb...
CSB
2005
IEEE
141views Bioinformatics» more  CSB 2005»
15 years 11 months ago
Joint Genomic and Metabolomic Analysis of Toxic Dose-Response Experiments
A methodology has been implemented for analyzing microarray and NMR spectral data obtained from the same set of toxic-exposure dose-response experiments. The NMR spectra additiona...
Gary L. Jahns, Nicholas J. DelRaso, Mark P. Westri...
CSB
2005
IEEE
130views Bioinformatics» more  CSB 2005»
15 years 11 months ago
TreeRefiner: A Tool for Refining a Multiple Alignment on a Phylogenetic Tree
We present TreeRefiner, a tool for refining multiple alignments of biological sequences. Given a multiple alignment, a phylogenetic tree, and scoring parameters as input, TreeRefi...
Aswath Manohar, Serafim Batzoglou