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ISBRA
2010
Springer
15 years 10 months ago
Uncovering Hidden Phylogenetic Consensus
Abstract. Many of the steps in phylogenetic reconstruction can be confounded by “rogue” taxa, taxa that cannot be placed with assurance anywhere within the tree—whose locatio...
Nicholas D. Pattengale, Krister M. Swenson, Bernar...
BIBE
2008
IEEE
160views Bioinformatics» more  BIBE 2008»
15 years 10 months ago
Parallel integration of heterogeneous genome-wide data sources
— Heterogeneous genome-wide data sources capture information on various aspects of complex biological systems. For instance, transcriptome, interactome and phenome-level informat...
Derek Greene, Kenneth Bryan, Padraig Cunningham
BIBE
2008
IEEE
203views Bioinformatics» more  BIBE 2008»
15 years 10 months ago
A study of the parameters affecting minimum detectable activity concentration level of clinical LSO PET scanners
— Recent studies in the field of molecular imaging have demonstrated the need for PET probes capable of imaging very weak activity distributions. Over this range of applications ...
Nicolas A. Karakatsanis, Konstantina S. Nikita
BIBE
2008
IEEE
142views Bioinformatics» more  BIBE 2008»
15 years 10 months ago
Optimizing performance, cost, and sensitivity in pairwise sequence search on a cluster of PlayStations
— The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadrati...
Ashwin M. Aji, Wu-chun Feng
155
Voted
BIBM
2008
IEEE
212views Bioinformatics» more  BIBM 2008»
15 years 10 months ago
Analysis of Multiplex Gene Expression Maps Obtained by Voxelation
Background: Gene expression signatures in the mammalian brain hold the key to understanding neural development and neurological disease. Researchers have previously used voxelatio...
Li An, Hongbo Xie, Mark H. Chin, Zoran Obradovic, ...