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131
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WABI
2009
Springer
128views Bioinformatics» more  WABI 2009»
15 years 10 months ago
Improving Inference of Transcriptional Regulatory Networks Based on Network Evolutionary Models
Abstract. Computational inference of transcriptional regulatory networks remains a challenging problem, in part due to the lack of strong network models. In this paper we present e...
Xiuwei Zhang, Bernard M. E. Moret
116
Voted
WABI
2009
Springer
130views Bioinformatics» more  WABI 2009»
15 years 10 months ago
Linear-Time Protein 3-D Structure Searching with Insertions and Deletions
It becomes more and more important to search for similar structures from molecular 3-D structure databases in the structural biology of the post genomic era. Two molecules are said...
Tetsuo Shibuya, Jesper Jansson, Kunihiko Sadakane
WABI
2009
Springer
162views Bioinformatics» more  WABI 2009»
15 years 10 months ago
Aligning Biomolecular Networks Using Modular Graph Kernels
Comparative analysis of biomolecular networks constructed using measurements from different conditions, tissues, and organisms offer a powerful approach to understanding the stru...
Fadi Towfic, M. Heather West Greenlee, Vasant Hona...
135
Voted
DEXA
2009
Springer
167views Database» more  DEXA 2009»
15 years 10 months ago
Alignment of Noisy and Uniformly Scaled Time Series
The alignment of noisy and uniformly scaled time series is an important but difficult task. Given two time series, one of which is a uniformly stretched subsequence of the other, w...
Constanze Lipowsky, Egor Dranischnikow, Herbert G&...
DNA
2009
Springer
145views Bioinformatics» more  DNA 2009»
15 years 10 months ago
Distributed Agreement in Tile Self-assembly
Abstract. Laboratory investigations have shown that a formal theory of fault-tolerance will be essential to harness nanoscale self-assembly as a medium of computation. Several rese...
Aaron Sterling