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168
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LION
2009
Springer
115views Optimization» more  LION 2009»
15 years 10 months ago
Flexible Stochastic Local Search for Haplotype Inference
Abstract. Haplotype Inference is a challenging problem in bioinformatics that consists in inferring the basic genetic constitution of diploid organisms on the basis of their genoty...
Luca Di Gaspero, Andrea Roli
158
Voted
LION
2009
Springer
114views Optimization» more  LION 2009»
15 years 10 months ago
Substitution Matrices and Mutual Information Approaches to Modeling Evolution
Abstract. Substitution matrices are at the heart of Bioinformatics: sequence alignment, database search, phylogenetic inference, protein family classication are based on Blosum, P...
Stephan Kitchovitch, Yuedong Song, Richard C. van ...
110
Voted
SEMWEB
2009
Springer
15 years 10 months ago
On Detecting High-Level Changes in RDF/S KBs
An increasing number of scientific communities rely on Semantic Web ontologies to share and interpret data within and across research domains. These common knowledge representatio...
Vicky Papavassiliou, Giorgos Flouris, Irini Fundul...
CF
2009
ACM
15 years 10 months ago
Quantitative analysis of sequence alignment applications on multiprocessor architectures
The exponential growth of databases that contains biological information (such as protein and DNA data) demands great efforts to improve the performance of computational platforms...
Friman Sánchez, Alex Ramírez, Mateo ...
133
Voted
BMEI
2008
IEEE
15 years 10 months ago
A New Approach for Tree Alignment Based on Local Re-Optimization
Multiple sequence alignment is the most fundamental task in bioinformatics and computational biology. In this paper, we present a new algorithm to conduct multiple sequences align...
Feng Yue, Jijun Tang