Sciweavers

2736 search results - page 413 / 548
» Bioinformatics
Sort
View
IEEEPACT
2005
IEEE
15 years 11 months ago
Exploiting Coarse-Grained Parallelism to Accelerate Protein Motif Finding with a Network Processor
While general-purpose processors have only recently employed chip multiprocessor (CMP) architectures, network processors (NPs) have used heterogeneous multi-core architectures sin...
Ben Wun, Jeremy Buhler, Patrick Crowley
SC
2005
ACM
15 years 11 months ago
Separating Abstractions from Resources in a Tactical Storage System
ng Abstractions from Resources in a Tactical Storage System Douglas Thain† , Sander Klous∗ , Justin Wozniak† , Paul Brenner† , Aaron Striegel† , Jesus Izaguirre† † - ...
Douglas Thain, Sander Klous, Justin M. Wozniak, Pa...
CIKM
2005
Springer
15 years 11 months ago
Exact match search in sequence data using suffix trees
We study suitable indexing techniques to support efficient exact match search in large biological sequence databases. We propose a suffix tree (ST) representation, called STA-DF, ...
Mihail Halachev, Nematollaah Shiri, Anand Thamildu...
CP
2005
Springer
15 years 11 months ago
CP(Graph): Introducing a Graph Computation Domain in Constraint Programming
Abstract. In an increasing number of domains such as bioinformatics, combinatorial graph problems arise. We propose a novel way to solve these problems, mainly those that can be tr...
Grégoire Dooms, Yves Deville, Pierre Dupont
CP
2005
Springer
15 years 11 months ago
Applying Constraint Programming to Rigid Body Protein Docking
In this paper we show how Constraint Programming (CP) techniques can improve the efficiency and applicability of grid-based algorithms for optimising surface contact between comple...
Ludwig Krippahl, Pedro Barahona