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WABI
2004
Springer
15 years 8 months ago
A Polynomial-Time Algorithm for the Matching of Crossing Contact-Map Patterns
Abstract. Contact maps are a model to capture the core information in the structure of biological molecules, e.g., proteins. A contact map consists of an ordered set ¡ of elements...
Jens Gramm
123
Voted
WABI
2004
Springer
109views Bioinformatics» more  WABI 2004»
15 years 8 months ago
Online Consensus and Agreement of Phylogenetic Trees
Computational heuristics are the primary methods for reconstruction of phylogenetic trees on large datasets. Most large-scale phylogenetic analyses produce numerous trees that are ...
Tanya Y. Berger-Wolf
WABI
2004
Springer
142views Bioinformatics» more  WABI 2004»
15 years 8 months ago
Linear Reduction for Haplotype Inference
Abstract. Haplotype inference problem asks for a set of haplotypes explaining a given set of genotypes. Popular software tools for haplotype inference (e.g., PHASE, HAPLOTYPER) as ...
Jingwu He, Alexander Zelikovsky
110
Voted
WABI
2004
Springer
116views Bioinformatics» more  WABI 2004»
15 years 8 months ago
Topological Rearrangements and Local Search Method for Tandem Duplication Trees
—The problem of reconstructing the duplication history of a set of tandemly repeated sequences was first introduced by Fitch [4]. Many recent studies deal with this problem, show...
Denis Bertrand, Olivier Gascuel
WABI
2004
Springer
132views Bioinformatics» more  WABI 2004»
15 years 8 months ago
Joint Analysis of DNA Copy Numbers and Gene Expression Levels
Abstract. Genomic instabilities, amplifications, deletions and translocations are often observed in tumor cells. In the process of cancer pathogenesis cells acquire multiple genom...
Doron Lipson, Amir Ben-Dor, Elinor Dehan, Zohar Ya...