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ICDE
2007
IEEE
124views Database» more  ICDE 2007»
15 years 11 months ago
Topology Search over Biological Databases
We introduce the notion of a data topology and the problem of topology search over databases. A data topology summarizes the set of all possible relationships that connect a given...
Lin Guo, Jayavel Shanmugasundaram, Golan Yona
BMCBI
2008
160views more  BMCBI 2008»
14 years 10 months ago
Dynamic sensitivity analysis of biological systems
Background: A mathematical model to understand, predict, control, or even design a real biological system is a central theme in systems biology. A dynamic biological system is alw...
Wu Hsiung Wu, Feng Sheng Wang, Maw Shang Chang
CVPR
2008
IEEE
15 years 12 months ago
Enhanced biologically inspired model
It has been demonstrated by Serre et al. that the biologically inspired model (BIM) is effective for object recognition. It outperforms many state-of-the-art methods in challengin...
Yongzhen Huang, Kaiqi Huang, Liangsheng Wang, Dach...
BMCBI
2007
154views more  BMCBI 2007»
14 years 10 months ago
Inferring biological networks with output kernel trees
Background: Elucidating biological networks between proteins appears nowadays as one of the most important challenges in systems biology. Computational approaches to this problem ...
Pierre Geurts, Nizar Touleimat, Marie Dutreix, Flo...
CIBCB
2005
IEEE
15 years 3 months ago
The Homology Kernel: A Biologically Motivated Sequence Embedding into Euclidean Space
— Part of the challenge of modeling protein sequences is their discrete nature. Many of the most powerful statistical and learning techniques are applicable to points in a Euclid...
Eleazar Eskin, Sagi Snir