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RECOMB
2002
Springer
15 years 10 months ago
A dimensionality reduction approach to modeling protein flexibility
Proteins are involved either directly or indirectly in all biological processes in living organisms. It is now widely accepted that conformational changes of proteins can critical...
Miguel L. Teodoro, George N. Phillips, Lydia E. Ka...
AHS
2007
IEEE
226views Hardware» more  AHS 2007»
15 years 4 months ago
Application of Self-Configurability for Autonomous, Highly-Localized Self-Regulation
In this paper, key features of biological vs. artificial systems are identified, along with a synopsis of important consequences of those features. An artificial substrate that co...
Nicholas J. Macias, Peter M. Athanas
NGC
2002
Springer
111views Communications» more  NGC 2002»
14 years 9 months ago
The Power of Communication: P Systems with Symport/Antiport
In the attempt to have a framework where the computation is done by communication only, we consider the biological phenomenon of trans-membrane transport of couples of chemicals (o...
Andrei Paun, Gheorghe Paun
ICTAC
2004
Springer
15 years 3 months ago
Replicative - Distribution Rules in P Systems with Active Membranes
Abstract. P systems (known also as membrane systems) are biologically motivated theoretical models of distributed and parallel computing. The two most interesting questions in the ...
Tseren-Onolt Ishdorj, Mihai Ionescu
RECOMB
2010
Springer
14 years 8 months ago
Novel Definition and Algorithm for Chaining Fragments with Proportional Overlaps
Chaining fragments is a crucial step in genome alignment. Existing chaining algorithms compute a maximum weighted chain with no overlaps allowed between adjacent fragments. In prac...
Raluca Uricaru, Alban Mancheron, Eric Rivals