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NAR
2010
281views more  NAR 2010»
14 years 4 months ago
PDBselect 1992-2009 and PDBfilter-select
PDBselect (http://bioinfo.tg.fh-giessen.de/pdb select/) is a list of representative protein chains with low mutual sequence identity selected from the protein data bank (PDB) to e...
Sven Griep, Uwe Hobohm
KDD
2005
ACM
153views Data Mining» more  KDD 2005»
15 years 10 months ago
Improving discriminative sequential learning with rare--but--important associations
Discriminative sequential learning models like Conditional Random Fields (CRFs) have achieved significant success in several areas such as natural language processing, information...
Xuan Hieu Phan, Minh Le Nguyen, Tu Bao Ho, Susumu ...
KDD
2001
ACM
118views Data Mining» more  KDD 2001»
15 years 10 months ago
Infominer: mining surprising periodic patterns
In this paper, we focus on mining surprising periodic patterns in a sequence of events. In many applications, e.g., computational biology, an infrequent pattern is still considere...
Jiong Yang, Wei Wang 0010, Philip S. Yu
ASM
2010
ASM
15 years 4 months ago
Using Event-B to Verify the Kmelia Components and Their Assemblies
and formal model, named Kmelia [1,2], with an associated language to specify components, their provided and required services and their assemblies; we also developed a framework na...
Pascal André, Gilles Ardourel, Christian At...
BIBE
2007
IEEE
128views Bioinformatics» more  BIBE 2007»
15 years 4 months ago
QOMA2: Optimizing the alignment of many sequences
Abstract—We consider the problem of aligning multiple protein sequences with the goal of maximizing the SP (Sum-of-Pairs) score, when the number of sequences is large. The QOMA (...
Xu Zhang, Tamer Kahveci