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» Biological Network Inference Using Redundancy Analysis
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BIOCOMP
2006
14 years 11 months ago
The Multi-Node Topological Overlap Measure For Gene Neighborhood Analysis
Defining the neighborhood of an initial set of nodes is an important task in network analysis. For example, we show that the neighborhood of an initial set of brain cancer related ...
Ai Li, Steve Horvath
BMCBI
2006
133views more  BMCBI 2006»
14 years 9 months ago
Web-based analysis of the mouse transcriptome using Genevestigator
Background: Gene function analysis often requires a complex and laborious sequence of laboratory and computer-based experiments. Choosing an effective experimental design generall...
Oliver Laule, Matthias Hirsch-Hoffmann, Tomas Hruz...
ITSSA
2006
109views more  ITSSA 2006»
14 years 9 months ago
Gene Expression Analysis in Multi-Agent Environment
Abstract. This paper presents a multi-agent approach to gene expression analysis and illustrates the working steps using real dataset produced from a microarray experiment. The ana...
H. C. Lam, M. Vazquez, B. Juneja, Scott C. Fahrenk...
BMCBI
2010
96views more  BMCBI 2010»
14 years 10 months ago
A statistical framework for differential network analysis from microarray data
Background: It has been long well known that genes do not act alone; rather groups of genes act in consort during a biological process. Consequently, the expression levels of gene...
Ryan Gill, Somnath Datta, Susmita Datta
MEMICS
2010
14 years 4 months ago
Modeling Gene Networks using Fuzzy Logic
Recently, almost uncontrolled technological progress allows so called high-throughput data collection for sophisticated and complex experimental biological systems analysis. Espec...
Artur Gintrowski