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» Biological pathway inference using manifold embedding
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ICASSP
2011
IEEE
12 years 10 months ago
Biological pathway inference using manifold embedding
Disease occurs due to aberrant modulation of biological pathways. Identification of activated gene pathways from gene expression data is an important problem. In this work, we de...
Arvind Rao, Alfred O. Hero
BMCBI
2005
189views more  BMCBI 2005»
13 years 6 months ago
Quantitative inference of dynamic regulatory pathways via microarray data
Background: The cellular signaling pathway (network) is one of the main topics of organismic investigations. The intracellular interactions between genes in a signaling pathway ar...
Wen-Chieh Chang, Chang-Wei Li, Bor-Sen Chen
BIOINFORMATICS
2007
117views more  BIOINFORMATICS 2007»
13 years 6 months ago
Mining biological networks for unknown pathways
Biological pathways provide significant insights on the interaction mechanisms of molecules. Presently, many essential pathways still remain unknown or incomplete for newly sequen...
Ali Cakmak, Gultekin Özsoyoglu
MICCAI
2010
Springer
13 years 4 months ago
Nonlinear Embedding towards Articulated Spine Shape Inference Using Higher-Order MRFs
In this paper we introduce a novel approach for inferring articulated spine models from images. A low-dimensional manifold embedding is created from a training set of prior mesh mo...
Samuel Kadoury, Nikos Paragios
ICPR
2006
IEEE
14 years 7 months ago
Simultaneous Inference of View and Body Pose using Torus Manifolds
Inferring 3D body pose as well as viewpoint from a single silhouette image is a challenging problem. We present a new generative model to represent shape deformations according to...
Ahmed M. Elgammal, Chan-Su Lee