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» Building Genetic Networks for Gene Expression Patterns
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IWANN
2009
Springer
15 years 4 months ago
GREAT: Gene Regulation EvAluation Tool
Our understanding of biological systems is highly dependent on the study of the mechanisms that regulate genetic expression. In this paper we present a tool to evaluate scientific ...
Catia Machado, Hugo P. Bastos, Francisco M. Couto
BIOCOMP
2007
14 years 11 months ago
Stability Analysis of Genetic Regulatory Network with Additive Noises
Background: Genetic regulatory networks (GRN) can be described by differential equations with SUM logic which has been found in many natural systems. Identification of the network...
Yufang Jin
TCBB
2010
136views more  TCBB 2010»
14 years 8 months ago
Integrating Data Clustering and Visualization for the Analysis of 3D Gene Expression Data
— The recent development of methods for extracting precise measurements of spatial gene expression patterns from three-dimensional (3D) image data opens the way for new analyses ...
Oliver Rübel, Gunther H. Weber, Min-Yu Huang,...
RECOMB
2007
Springer
15 years 3 months ago
Network Legos: Building Blocks of Cellular Wiring Diagrams
Publicly-available data sets provide detailed and large-scale information on multiple types of molecular interaction networks in a number of model organisms. These multi-modal univ...
T. M. Murali, Corban G. Rivera
BMCBI
2010
106views more  BMCBI 2010»
14 years 9 months ago
A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes
Background: Observed co-expression of a group of genes is frequently attributed to co-regulation by shared transcription factors. This assumption has led to the hypothesis that pr...
Guofeng Meng, Axel Mosig, Martin Vingron