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» Building Genetic Networks for Gene Expression Patterns
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IJBRA
2006
59views more  IJBRA 2006»
14 years 9 months ago
Predicting altered pathways using extendable scaffolds
: Many diseases, especially solid tumors, involve the disruption or deregulation of cellular processes. Most current work using gene expression and other high-throughput data, simp...
B. M. Broom, T. J. McDonnell, D. Subramanian
KDD
2006
ACM
142views Data Mining» more  KDD 2006»
15 years 10 months ago
Automatic mining of fruit fly embryo images
We present FEMine, an automatic system for image-based gene expression analysis. We perform experiments on the largest publicly available collection of Drosophila ISH (in situ hyb...
Jia-Yu Pan, André G. R. Balan, Eric P. Xing...
RECOMB
2008
Springer
15 years 10 months ago
Accounting for Non-genetic Factors Improves the Power of eQTL Studies
Abstract. The recent availability of large scale data sets profiling single nucleotide polymorphisms (SNPs) and gene expression across different human populations, has directed muc...
Oliver Stegle, Anitha Kannan, Richard Durbin, John...
BMCBI
2007
122views more  BMCBI 2007»
14 years 9 months ago
Dissecting complex transcriptional responses using pathway-level scores based on prior information
Background: The genomewide pattern of changes in mRNA expression measured using DNA microarrays is typically a complex superposition of the response of multiple regulatory pathway...
Harmen J. Bussemaker, Lucas D. Ward, André ...
EUROGP
2004
Springer
123views Optimization» more  EUROGP 2004»
15 years 3 months ago
Global Distributed Evolution of L-Systems Fractals
Internet based parallel genetic programming (GP) creates fractal patterns like Koch’s snow flake. Pfeiffer, http://www.cs.ucl.ac.uk /staff/W.Langdon/pfeiffer.html, by analogy w...
William B. Langdon