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» Building Genetic Networks for Gene Expression Patterns
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CCIA
2007
Springer
15 years 3 months ago
Mendelian error detection in complex pedigrees using weighted constraint satisfaction techniques
With the arrival of high throughput genotyping techniques, the detection of likely genotyping errors is becoming an increasingly important problem. In this paper we are interested...
Martí Sánchez, Simon de Givry, Thoma...
BMCBI
2006
113views more  BMCBI 2006»
14 years 9 months ago
In silico discovery of human natural antisense transcripts
Background: Several high-throughput searches for ppotential natural antisense transcripts (NATs) have been performed recently, but most of the reports were focused on cis type. A ...
Yuan-Yuan Li, Lei Qin, Zong-Ming Guo, Lei Liu, Hao...
EUROPAR
2009
Springer
15 years 4 months ago
A Case Study of Communication Optimizations on 3D Mesh Interconnects
Optimal network performance is critical to efficient parallel scaling for communication-bound applications on large machines. With wormhole routing, no-load latencies do not increa...
Abhinav Bhatele, Eric J. Bohm, Laxmikant V. Kal&ea...
BIOCOMP
2007
14 years 11 months ago
Prediction of trans-antisense Transcripts in Arabidopsis thaliana
Background: Natural antisense transcripts (NATs) are coding or non-coding RNAs with sequence complementarity to other transcripts (sense transcripts). These RNAs could potentially...
Huan Wang, Nam-Hai Chua, Xiu-Jie Wang
IWANN
2009
Springer
15 years 4 months ago
ZARAMIT: A System for the Evolutionary Study of Human Mitochondrial DNA
Abstract. ZARAMIT is an information system capable of fully automated phylogeny reconstruction. Methods have been tailored to mitochondrial DNA sequences, with focus on subproblem ...
Roberto Blanco, Elvira Mayordomo