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» Building Large Knowledge Bases in Molecular Biology
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ICDE
2009
IEEE
117views Database» more  ICDE 2009»
15 years 11 months ago
DynaCet: Building Dynamic Faceted Search Systems over Databases
Extracting information and insights from large databases is a time-consuming activity and has received considerable research attention recently. In this demo, we present DynaCet - ...
Senjuti Basu Roy, Haidong Wang, Ullas Nambiar, Gau...
FOIS
2006
14 years 11 months ago
Modular Ontology Design Using Canonical Building Blocks in the Biochemistry Domain
The field of BioInformatics has become a major venue for the development and application of computational ontologies. Ranging from controlled vocabularies to annotation of experim...
Christopher J. Thomas, Amit P. Sheth, William S. Y...
BIOINFORMATICS
2007
83views more  BIOINFORMATICS 2007»
14 years 10 months ago
Exploring biological network structure using exponential random graph models
Motivation: The functioning of biological networks depends in large part on their complex underlying structure. When studying their systemic nature many modeling approaches focus ...
Zachary M. Saul, Vladimir Filkov
ROCAI
2004
Springer
15 years 3 months ago
Learning Mixtures of Localized Rules by Maximizing the Area Under the ROC Curve
We introduce a model class for statistical learning which is based on mixtures of propositional rules. In our mixture model, the weight of a rule is not uniform over the entire ins...
Tobias Sing, Niko Beerenwinkel, Thomas Lengauer
BMCBI
2010
178views more  BMCBI 2010»
14 years 10 months ago
An improved method for scoring protein-protein interactions using semantic similarity within the Gene Ontology
Background: Semantic similarity measures are useful to assess the physiological relevance of protein-protein interactions (PPIs). They quantify similarity between proteins based o...
Shobhit Jain, Gary D. Bader