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» Building Large Knowledge Bases in Molecular Biology
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KCAP
2003
ACM
15 years 3 months ago
Collecting commonsense experiences
Humans naturally share knowledge by telling stories. This is a form of knowledge exchange we engage in right from early childhood, and over time we learn to recall, order and orga...
Push Singh, Barbara Barry
BMCBI
2008
130views more  BMCBI 2008»
14 years 10 months ago
Structural descriptor database: a new tool for sequence-based functional site prediction
Background: The Structural Descriptor Database (SDDB) is a web-based tool that predicts the function of proteins and functional site positions based on the structural properties o...
Juliana S. Bernardes, Jorge H. Fernandez, Ana Tere...
KES
2006
Springer
14 years 9 months ago
Classification Using Multiple and Negative Target Rules
Rules are a type of human-understandable knowledge, and rule-based methods are very popular in building decision support systems. However, most current rule based classification sy...
Jiuyong Li, Jason Jones
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WABI
2009
Springer
117views Bioinformatics» more  WABI 2009»
15 years 4 months ago
A Simulation Study Comparing Supertree and Combined Analysis Methods Using SMIDGen
Background: Supertree methods comprise one approach to reconstructing large molecular phylogenies given multi-marker datasets: trees are estimated on each marker and then combined...
M. Shel Swenson, François Barbançon,...
BIBM
2009
IEEE
172views Bioinformatics» more  BIBM 2009»
15 years 2 months ago
Identifying Gene Signatures from Cancer Progression Data Using Ordinal Analysis
—A comprehensive understanding of cancer progression may shed light on genetic and molecular mechanisms of oncogenesis, and it may provide much needed information for effective d...
Yoon Soo Pyon, Jing Li