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» Building Large Knowledge Bases in Molecular Biology
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WEBI
2010
Springer
14 years 7 months ago
A Scalable Indexing Mechanism for Ontology-Based Information Integration
In recent years, there has been an explosion of publicly available RDF and OWL web pages. Some of these pages are static text files, while others are dynamically generated from la...
Yingjie Li, Abir Qasem, Jeff Heflin
ACMSE
2006
ACM
15 years 3 months ago
Automatic quality assessment of Affymetrix GeneChip data
Computing reliable gene expression levels from microarray experiments is a sophisticated process with many potential pitfalls. Quality control is one of the most important steps i...
Steffen Heber, Beate Sick
AB
2007
Springer
15 years 4 months ago
Analyzing Pathways Using SAT-Based Approaches
Abstract. A network of reactions is a commonly used paradigm for representing knowledge about a biological process. How does one understand such generic networks and answer queries...
Ashish Tiwari, Carolyn L. Talcott, Merrill Knapp, ...
BMCBI
2007
95views more  BMCBI 2007»
14 years 10 months ago
ZPS: visualization of recent adaptive evolution of proteins
Background: Detection of adaptive amino acid changes in proteins under recent short-term selection is of great interest for researchers studying microevolutionary processes in mic...
Sujay Chattopadhyay, Daniel E. Dykhuizen, Evgeni V...
BMCBI
2007
123views more  BMCBI 2007»
14 years 9 months ago
BIRCH: A user-oriented, locally-customizable, bioinformatics system
Background: Molecular biologists need sophisticated analytical tools which often demand extensive computational resources. While finding, installing, and using these tools can be ...
Brian Fristensky