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» Building Large Knowledge Bases in Molecular Biology
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DAGSTUHL
2009
15 years 1 months ago
Learning Highly Structured Manifolds: Harnessing the Power of SOMs
Abstract. In this paper we elaborate on the challenges of learning manifolds that have many relevant clusters, and where the clusters can have widely varying statistics. We call su...
Erzsébet Merényi, Kadim Tasdemir, Li...
116
Voted
KDD
2008
ACM
138views Data Mining» more  KDD 2008»
16 years 29 days ago
A visual-analytic toolkit for dynamic interaction graphs
In this article we describe a visual-analytic tool for the interrogation of evolving interaction network data such as those found in social, bibliometric, WWW and biological appli...
Xintian Yang, Sitaram Asur, Srinivasan Parthasarat...
108
Voted
BMCBI
2006
166views more  BMCBI 2006»
15 years 18 days ago
Extraction of phylogenetic network modules from the metabolic network
Background: In bio-systems, genes, proteins and compounds are related to each other, thus forming complex networks. Although each organism has its individual network, some organis...
Takuji Yamada, Minoru Kanehisa, Susumu Goto
105
Voted
ESWS
2009
Springer
15 years 7 months ago
MoKi: The Enterprise Modelling Wiki
Abstract. Enterprise modelling focuses on the construction of a structured description, the so-called enterprise model, which represents aspects relevant to the activity of an ente...
Chiara Ghidini, Barbara Kump, Stefanie N. Lindstae...
120
Voted
BMCBI
2006
143views more  BMCBI 2006»
15 years 18 days ago
Fast estimation of the difference between two PAM/JTT evolutionary distances in triplets of homologous sequences
Background: The estimation of the difference between two evolutionary distances within a triplet of homologs is a common operation that is used for example to determine which of t...
Christophe Dessimoz, Manuel Gil, Adrian Schneider,...