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BMCBI
2008
118views more  BMCBI 2008»
14 years 10 months ago
DOVIS: an implementation for high-throughput virtual screening using AutoDock
Background: Molecular-docking-based virtual screening is an important tool in drug discovery that is used to significantly reduce the number of possible chemical compounds to be i...
Shuxing Zhang, Kamal Kumar, Xiaohui Jiang, Anders ...
CIBCB
2007
IEEE
15 years 1 months ago
Hybrid Architecture for Accelerating DNA Codeword Library Searching
-- A large and reliable DNA codeword library is the key to the success of DNA based computing. Searching for the set of reliable DNA codewords is an NP-hard problem, which can take...
Qinru Qiu, Daniel J. Burns, Qing Wu, Prakash Mukre
CCGRID
2006
IEEE
15 years 3 months ago
Scalable Approaches for Supporting MPI-IO Atomicity
Scalable atomic and parallel access to noncontiguous regions of a file is essential to exploit high performance I/O as required by large-scale applications. Parallel I/O framewor...
Peter M. Aarestad, Avery Ching, George K. Thiruvat...
ICDM
2007
IEEE
137views Data Mining» more  ICDM 2007»
15 years 4 months ago
Locally Constrained Support Vector Clustering
Support vector clustering transforms the data into a high dimensional feature space, where a decision function is computed. In the original space, the function outlines the bounda...
Dragomir Yankov, Eamonn J. Keogh, Kin Fai Kan
IPPS
2006
IEEE
15 years 3 months ago
MegaProto/E: power-aware high-performance cluster with commodity technology
In our research project named “Mega-Scale Computing Based on Low-Power Technology and Workload Modeling”, we have been developing a prototype cluster not based on ASIC or FPGA...
Taisuke Boku, Mitsuhisa Sato, Daisuke Takahashi, H...