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BIOINFORMATICS
2006
104views more  BIOINFORMATICS 2006»
14 years 10 months ago
CAFE: a computational tool for the study of gene family evolution
Tijl De Bie, Nello Cristianini, Jeffery P. Demuth,...
NAR
2007
117views more  NAR 2007»
14 years 10 months ago
FGF: A web tool for Fishing Gene Family in a whole genome database
Gene duplication is an important process in evolution. The availability of genome sequences of a number of organisms has made it possible to conduct comprehensive searches for dup...
Hongkun Zheng, Junjie Shi, Xiaodong Fang, Yuan Li,...
JCB
2000
137views more  JCB 2000»
14 years 10 months ago
NOTUNG: A Program for Dating Gene Duplications and Optimizing Gene Family Trees
Large scale gene duplication is a major force driving the evolution of genetic functional innovation. Whole genome duplications are widely believed to have played an important rol...
Kevin Chen, Dannie Durand, Martin Farach-Colton
BMCBI
2008
91views more  BMCBI 2008»
14 years 10 months ago
t2prhd: a tool to study the patterns of repeat evolution
Background: The models developed to characterize the evolution of multigene families (such as the birth-and-death and the concerted models) have also been applied on the level of ...
Botond Sipos, Kálmán Somogyi, Istv&a...
RECOMB
2009
Springer
15 years 11 months ago
New Perspectives on Gene Family Evolution: Losses in Reconciliation and a Link with Supertrees
Reconciliation between a set of gene trees and a species tree is the most commonly used approach to infer the duplication and loss events in the evolution of gene families, given a...
Cedric Chauve, Nadia El-Mabrouk