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BIOINFORMATICS
2006
87views more  BIOINFORMATICS 2006»
14 years 9 months ago
COPASI - a COmplex PAthway SImulator
Simulation and modeling is becoming one of the standard approaches to understand complex biochemical processes. Therefore, there is a big need for software tools that allow access...
Stefan Hoops, Sven Sahle, Ralph Gauges, Christine ...
BIBE
2009
IEEE
252views Bioinformatics» more  BIBE 2009»
15 years 4 months ago
Multi-Agents System to Model Cell Signalling by Using Fuzzy Cognitive Maps. Application to Computer Simulation of Multiple Myelo
—In order to simulate biological processes, we use multi-agents system. However, modelling cell behavior in systems biology is complex and may be based on intracellular biochemic...
Vincent Rodin, Gabriel Querrec, Pascal Ballet, Fra...
BIOCOMP
2006
14 years 11 months ago
Petri Net Based Model Of The T Cell Receptor Signaling Pathway
Intracellular signaling pathways as well as the interactions and coordination that exist among them are complex and difficult to visualize and understand. Computer-based models of...
Srinidhi Jayasuryan, Anil Bamezai, Vijay Gehlot
WABI
2009
Springer
155views Bioinformatics» more  WABI 2009»
15 years 4 months ago
A Markov Classification Model for Metabolic Pathways
Background: This paper considers the problem of identifying pathways through metabolic networks that relate to a specific biological response. Our proposed model, HME3M, first ide...
Timothy Hancock, Hiroshi Mamitsuka
IJCNN
2007
IEEE
15 years 3 months ago
Modeling Overlapping Execution/Observation Brain Pathways
— Recent brain imaging studies on primates revealed that a network of brain areas is activated both during observation and during execution of movements. The present work aims at...
Michail Maniadakis, Manolis Hourdakis, Panos E. Tr...