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DASFAA
2003
IEEE
151views Database» more  DASFAA 2003»
15 years 8 months ago
Approximate String Matching in DNA Sequences
Approximate string matching on large DNA sequences data is very important in bioinformatics. Some studies have shown that suffix tree is an efficient data structure for approxim...
Lok-Lam Cheng, David Wai-Lok Cheung, Siu-Ming Yiu
124
Voted
RECOMB
2004
Springer
16 years 3 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
WWW
2009
ACM
16 years 4 months ago
Enhancing diversity, coverage and balance for summarization through structure learning
Document summarization plays an increasingly important role with the exponential growth of documents on the Web. Many supervised and unsupervised approaches have been proposed to ...
Liangda Li, Ke Zhou, Gui-Rong Xue, Hongyuan Zha, Y...
120
Voted
BMCBI
2007
112views more  BMCBI 2007»
15 years 3 months ago
AUG_hairpin: prediction of a downstream secondary structure influencing the recognition of a translation start site
Background: The translation start site plays an important role in the control of translation efficiency of eukaryotic mRNAs. The recognition of the start AUG codon by eukaryotic r...
Alexey V. Kochetov, Andrey Palyanov, Igor I. Titov...
138
Voted
SIAMMAX
2010
224views more  SIAMMAX 2010»
14 years 10 months ago
Robust Approximate Cholesky Factorization of Rank-Structured Symmetric Positive Definite Matrices
Abstract. Given a symmetric positive definite matrix A, we compute a structured approximate Cholesky factorization A RT R up to any desired accuracy, where R is an upper triangula...
Jianlin Xia, Ming Gu