— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...
Rezaul Alam Chowdhury, Hai-son Le, Vijaya Ramachan...
We consider the issues of implicitness and cache-obliviousness in the classical dictionary problem for n distinct keys over an unbounded and ordered universe. One finding in this ...
We present a new cache oblivious scheme for iterative stencil computations that performs beyond system bandwidth limitations as though gigabytes of data could reside in an enormou...
Robert Strzodka, Mohammed Shaheen, Dawid Pajak, Ha...
Stencil-based kernels constitute the core of many scientific applications on block-structured grids. Unfortunately, these codes achieve a low fraction of peak performance, due pr...
Shoaib Kamil, Kaushik Datta, Samuel Williams, Leon...
Abstract--One important bottleneck when visualizing large data sets is the data transfer between processor and memory. Cacheaware (CA) and cache-oblivious (CO) algorithms take into...