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114
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WABI
2007
Springer
122views Bioinformatics» more  WABI 2007»
15 years 10 months ago
Algorithms for the Extraction of Synteny Blocks from Comparative Maps
In comparing genomic maps, it is often difficult to distinguish mapping errors and incorrectly resolved paralogies from genuine rearrangements of the genomes. A solution to this ...
Vicky Choi, Chunfang Zheng, Qian Zhu, David Sankof...
166
Voted
IPPS
2006
IEEE
15 years 10 months ago
Multiple sequence alignment by quantum genetic algorithm
In this paper we describe a new approach for the well known problem in bioinformatics: Multiple Sequence Alignment (MSA). MSA is fundamental task as it represents an essential pla...
L. Abdesslem, M. Soham, B. Mohamed
BIBE
2005
IEEE
115views Bioinformatics» more  BIBE 2005»
15 years 9 months ago
GOMIT: A Generic and Adaptive Annotation Algorithm Based on Gene Ontology Term Distributions
We address the issue of providing highly informative annotations using information revealed by the structured vocabularies of Gene Ontology (GO). For a target, a set of candidate ...
In-Yee Lee, Jan-Ming Ho, Ming-Syan Chen
ISCA
2008
IEEE
136views Hardware» more  ISCA 2008»
15 years 4 months ago
A Randomized Queueless Algorithm for Breadth-First Search
First Come First Served is a policy that is accepted for implementing fairness in a number of application domains such as scheduling in Operating Systems [28, 11], scheduling web ...
K. Subramani, Kamesh Madduri
DASFAA
2006
IEEE
123views Database» more  DASFAA 2006»
15 years 10 months ago
DTD-Diff: A Change Detection Algorithm for DTDs
The DTD of a set of XML documents may change due to many reasons such as changes to the real world events, changes to the user’s requirements, and mistakes in the initial design....
Erwin Leonardi, Tran T. Hoai, Sourav S. Bhowmick, ...