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BMCBI
2008
142views more  BMCBI 2008»
14 years 11 months ago
Microarray data mining: A novel optimization-based approach to uncover biologically coherent structures
Background: DNA microarray technology allows for the measurement of genome-wide expression patterns. Within the resultant mass of data lies the problem of analyzing and presenting...
Meng Piao Tan, Erin N. Smith, James R. Broach, Chr...
CORR
2010
Springer
167views Education» more  CORR 2010»
14 years 11 months ago
Network Flow Algorithms for Structured Sparsity
We consider a class of learning problems that involve a structured sparsityinducing norm defined as the sum of -norms over groups of variables. Whereas a lot of effort has been pu...
Julien Mairal, Rodolphe Jenatton, Guillaume Obozin...
APIN
2007
118views more  APIN 2007»
14 years 11 months ago
Using genetic algorithms to reorganize superpeer structure in peer to peer networks
In this thesis, we describe a genetic algorithm for optimizing the superpeer structure of semantic peer to peer networks. Peer to peer, also called P2P, networks enable us to sear...
Jaymin Kessler, Khaled Rasheed, Ismailcem Budak Ar...
RECOMB
2002
Springer
15 years 11 months ago
Discovering local structure in gene expression data: the order-preserving submatrix problem
This paper concerns the discovery of patterns in gene expression matrices, in which each element gives the expression level of a given gene in a given experiment. Most existing me...
Amir Ben-Dor, Benny Chor, Richard M. Karp, Zohar Y...
ISAAC
2004
Springer
153views Algorithms» more  ISAAC 2004»
15 years 4 months ago
Canonical Data Structure for Interval Probe Graphs
The class of interval probe graphs is introduced to deal with the physical mapping and sequencing of DNA as a generalization of interval graphs. The polynomial time recognition al...
Ryuhei Uehara