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BMCBI
2007
131views more  BMCBI 2007»
15 years 6 months ago
FUNC: a package for detecting significant associations between gene sets and ontological annotations
Background: Genome-wide expression, sequence and association studies typically yield large sets of gene candidates, which must then be further analysed and interpreted. Informatio...
Kay Prüfer, Bjoern Muetzel, Hong Hai Do, Gunt...
BMCBI
2010
134views more  BMCBI 2010»
15 years 6 months ago
R-Gada: a fast and flexible pipeline for copy number analysis in association studies
Background: Genome-wide association studies (GWAS) using Copy Number Variation (CNV) are becoming a central focus of genetic research. CNVs have successfully provided target genom...
Roger Pique-Regi, Alejandro Cáceres, Juan R...
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BMCBI
2007
166views more  BMCBI 2007»
15 years 6 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
TIP
2010
182views more  TIP 2010»
15 years 1 months ago
Flexible Manifold Embedding: A Framework for Semi-Supervised and Unsupervised Dimension Reduction
We propose a unified manifold learning framework for semi-supervised and unsupervised dimension reduction by employing a simple but effective linear regression function to map the ...
Feiping Nie, Dong Xu, Ivor Wai-Hung Tsang, Changsh...
ICDE
2003
IEEE
138views Database» more  ICDE 2003»
16 years 7 months ago
Using State Modules for Adaptive Query Processing
We present a query architecture in which join operators are decomposed into their constituent data structures (State Modules, or SteMs), and dataflow among these SteMs is managed ...
Vijayshankar Raman, Amol Deshpande, Joseph M. Hell...