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» Can Parallel Algorithms Enhance Serial Implementation
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119
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IPPS
2009
IEEE
15 years 9 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
CORR
2007
Springer
172views Education» more  CORR 2007»
15 years 2 months ago
A Data-Parallel Version of Aleph
This is to present work on modifying the Aleph ILP system so that it evaluates the hypothesised clauses in parallel by distributing the data-set among the nodes of a parallel or di...
Stasinos Konstantopoulos
116
Voted
SAC
2002
ACM
15 years 2 months ago
Statistical properties of the simulated time horizon in conservative parallel discrete-event simulations
We investigate the universal characteristics of the simulated time horizon of the basic conservative parallel algorithm when implemented on regular lattices. This technique [1, 2]...
G. Korniss, M. A. Novotny, A. K. Kolakowska, H. Gu...
123
Voted
WCRE
2003
IEEE
15 years 7 months ago
Extracting an Explicitly Data-Parallel Representation of Image-Processing Programs
Our research goal is to retarget image processing programs written in sequential languages (e.g., C) to architectures with data-parallel processing capabilities. Image processing ...
Lewis B. Baumstark Jr., Murat Guler, Linda M. Will...
IPPS
2010
IEEE
15 years 10 days ago
Efficient and scalable parallel reconstruction of sibling relationships from genetic data in wild populations
Wild populations of organism are often difficult to study in their natural settings. Often, it is possible to infer mating information about these species by genotyping the offspri...
Saad I. Sheikh, Ashfaq A. Khokhar, Tanya Y. Berger...