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» Ch MPI: Interpretive Parallel Computing in C
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IPPS
2009
IEEE
15 years 4 months ago
Sparse collective operations for MPI
Abstract—We discuss issues in designing sparse (nearest neighbor) collective operations for communication and reduction operations in small neighborhoods for the Message Passing ...
Torsten Hoefler, Jesper Larsson Träff
IPPS
2005
IEEE
15 years 3 months ago
Enhancing NIC Performance for MPI using Processing-in-Memory
Processing-in-Memory (PIM) technology encompasses a range of research leveraging a tight coupling of memory and processing. The most unique features of the technology are extremel...
Arun Rodrigues, Richard C. Murphy, Ron Brightwell,...
CLUSTER
2003
IEEE
15 years 3 months ago
Implications of a PIM Architectural Model for MPI
Memory may be the only system component that is more commoditized than a microprocessor. To simultaneously exploit this and address the impending memory wall, processing in memory...
Arun Rodrigues, Richard C. Murphy, Peter M. Kogge,...
ICPADS
2008
IEEE
15 years 4 months ago
Parallel Large Scale Inference of Protein Domain Families
The resolution of combinatorial assortments of protein sequences into domains is a prerequisite for protein sequence interpretation. However the recognition and clustering of homo...
Daniel Kahn, Clément Rezvoy, Fréd&ea...
IJHPCA
2010
105views more  IJHPCA 2010»
14 years 8 months ago
A Pipelined Algorithm for Large, Irregular All-Gather Problems
We describe and evaluate a new, pipelined algorithm for large, irregular all-gather problems. In the irregular all-gather problem each process in a set of processes contributes in...
Jesper Larsson Träff, Andreas Ripke, Christia...