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» Challenges for knowledge discovery in biology
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TCBB
2010
80views more  TCBB 2010»
14 years 11 months ago
On the Importance of Comprehensible Classification Models for Protein Function Prediction
—The literature on protein function prediction is currently dominated by works aimed at maximizing predictive accuracy, ignoring the important issues of validation and interpreta...
Alex Alves Freitas, Daniela Wieser, Rolf Apweiler
145
Voted
ESWS
2005
Springer
15 years 6 months ago
RELFIN - Topic Discovery for Ontology Enhancement and Annotation
While classic information retrieval methods return whole documents as a result of a query, many information demands would be better satisfied by fine-grain access inside the docu...
Markus Schaal, Roland M. Müller, Marko Brunze...
BMCBI
2010
155views more  BMCBI 2010»
15 years 19 days ago
FunctSNP: an R package to link SNPs to functional knowledge and dbAutoMaker: a suite of Perl scripts to build SNP databases
Background: Whole genome association studies using highly dense single nucleotide polymorphisms (SNPs) are a set of methods to identify DNA markers associated with variation in a ...
Stephen J. Goodswen, Cedric Gondro, Nathan S. Wats...
110
Voted
EDBT
2009
ACM
138views Database» more  EDBT 2009»
15 years 7 months ago
FOGGER: an algorithm for graph generator discovery
To our best knowledge, all existing graph pattern mining algorithms can only mine either closed, maximal or the complete set of frequent subgraphs instead of graph generators whic...
Zhiping Zeng, Jianyong Wang, Jun Zhang, Lizhu Zhou
117
Voted
CIDR
2009
141views Algorithms» more  CIDR 2009»
15 years 1 months ago
Sailing the Information Ocean with Awareness of Currents: Discovery and Application of Source Dependence
The Web has enabled the availability of a huge amount of useful information, but has also eased the ability to spread false information and rumors across multiple sources, making ...
Laure Berti-Equille, Anish Das Sarma, Xin Dong, Am...