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» Challenges for knowledge discovery in biology
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102
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ICDM
2007
IEEE
175views Data Mining» more  ICDM 2007»
15 years 6 months ago
gApprox: Mining Frequent Approximate Patterns from a Massive Network
Recently, there arise a large number of graphs with massive sizes and complex structures in many new applications, such as biological networks, social networks, and the Web, deman...
Chen Chen, Xifeng Yan, Feida Zhu, Jiawei Han
DIS
2006
Springer
15 years 4 months ago
Prediction of Domain-Domain Interactions Using Inductive Logic Programming from Multiple Genome Databases
Protein domains are the building blocks of proteins, and their interactions are crucial in forming stable protein-protein interactions (PPI) and take part in many cellular processe...
Thanh Phuong Nguyen, Tu Bao Ho
115
Voted
BIOCOMP
2009
14 years 10 months ago
Gene Expression Analysis Using Communications, Coding and Information Theory Based Models
- Identification and annotation of all the functional elements in the genome, including genes and regulatory sequences, is a fundamental challenge in genomics and computational bio...
Mohammad Al Bataineh, Lun Huang, Ismaeel Muhamed, ...
106
Voted
BMCBI
2008
133views more  BMCBI 2008»
15 years 19 days ago
SPIKE - a database, visualization and analysis tool of cellular signaling pathways
Background: Biological signaling pathways that govern cellular physiology form an intricate web of tightly regulated interlocking processes. Data on these regulatory networks are ...
Ran Elkon, Rita Vesterman, Nira Amit, Igor Ulitsky...
IV
2008
IEEE
296views Visualization» more  IV 2008»
15 years 7 months ago
Revealing Subnetwork Roles using Contextual Visualization: Comparison of Metabolic Networks
This article is addressing a recurrent problem in biology: mining newly built large scale networks. Our approach consists in comparing these new networks to well known ones. The v...
Romain Bourqui, Fabien Jourdan