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BMCBI
2008
103views more  BMCBI 2008»
13 years 6 months ago
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
Background: Protein structure analysis and comparison are major challenges in structural bioinformatics. Despite the existence of many tools and algorithms, very few of them have ...
Mallika Veeramalai, Yuzhen Ye, Adam Godzik
BMCBI
2008
130views more  BMCBI 2008»
13 years 6 months ago
An enhanced partial order curve comparison algorithm and its application to analyzing protein folding trajectories
Background: Understanding how proteins fold is essential to our quest in discovering how life works at the molecular level. Current computation power enables researchers to produc...
Hong Sun, Hakan Ferhatosmanoglu, Motonori Ota, Yus...
PPL
2008
185views more  PPL 2008»
13 years 6 months ago
On Design and Application Mapping of a Network-on-Chip(NoC) Architecture
As the number of integrated IP cores in the current System-on-Chips (SoCs) keeps increasing, communication requirements among cores can not be sufficiently satisfied using either ...
Jun Ho Bahn, Seung Eun Lee, Yoon Seok Yang, Jungso...
JCB
1998
129views more  JCB 1998»
13 years 6 months ago
A Sticker-Based Model for DNA Computation
We introduce a new model of molecular computation that we call the sticker model. Like many previous proposals it makes use of DNA strands as the physical substrate in which infor...
Sam T. Roweis, Erik Winfree, Richard Burgoyne, Nic...
VLDB
2002
ACM
154views Database» more  VLDB 2002»
13 years 5 months ago
I/O-Conscious Data Preparation for Large-Scale Web Search Engines
Given that commercial search engines cover billions of web pages, efficiently managing the corresponding volumes of disk-resident data needed to answer user queries quickly is a f...
Maxim Lifantsev, Tzi-cker Chiueh