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BIBM
2007
IEEE
132views Bioinformatics» more  BIBM 2007»
15 years 10 months ago
A Divide-and-Conquer Implementation of Three Sequence Alignment and Ancestor Inference
In this paper, we present an algorithm to simultaneously align three biological sequences with affine gap model and infer their common ancestral sequence. Our algorithm can be fu...
Feng Yue, Jijun Tang
ECRTS
2007
IEEE
15 years 10 months ago
Cache-Aware Timing Analysis of Streaming Applications
Of late, there has been a considerable interest in models, algorithms and methodologies specifically targeted towards designing hardware and software for streaming applications. ...
Samarjit Chakraborty, Tulika Mitra, Abhik Roychoud...
ICPP
2007
IEEE
15 years 10 months ago
Multi-Layer Event Trace Analysis for Parallel I/O Performance Tuning
The complexity of parallel I/O systems lies in the deep I/O stack with many software layers and concurrent I/O request handling at multiple layers. This paper explores multi-layer...
Pin Lu, Kai Shen
ADBIS
2006
Springer
109views Database» more  ADBIS 2006»
15 years 10 months ago
Content Is Capricious: A Case for Dynamic System Generation
Abstract. Database modeling is based on the assumption of a high regularity of its application areas, an assumption which applies to both the structure of data and the behavior of ...
Hans-Werner Sehring, Sebastian Bossung, Joachim W....
INFOVIS
2005
IEEE
15 years 10 months ago
The Visual Code Navigator: An Interactive Toolset for Source Code Investigation
We present the Visual Code Navigator, a set of three interrelated visual tools that we developed for exploring large source code software projects from three different perspective...
Gerard Lommerse, Freek Nossin, Lucian Voinea, Alex...