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» Challenges in Software Evolution
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BMCBI
2007
151views more  BMCBI 2007»
15 years 4 months ago
Minimus: a fast, lightweight genome assembler
Background: Genome assemblers have grown very large and complex in response to the need for algorithms to handle the challenges of large whole-genome sequencing projects. Many of ...
Daniel D. Sommer, Arthur L. Delcher, Steven L. Sal...
BMCBI
2008
98views more  BMCBI 2008»
15 years 4 months ago
MTAP: The Motif Tool Assessment Platform
Background: In recent years, substantial effort has been applied to de novo regulatory motif discovery. At this time, more than 150 software tools exist to detect regulatory bindi...
Daniel Quest, Kathryn Dempsey, Mohammad Shafiullah...
SOFTWARE
2002
15 years 4 months ago
Temporal Probabilistic Concepts from Heterogeneous Data Sequences
We consider the problem of characterisation of sequences of heterogeneous symbolic data that arise from a common underlying temporal pattern. The data, which are subject to impreci...
Sally I. McClean, Bryan W. Scotney, Fiona Palmer
130
Voted
PLDI
2011
ACM
14 years 7 months ago
Automated atomicity-violation fixing
Fixing software bugs has always been an important and timeconsuming process in software development. Fixing concurrency bugs has become especially critical in the multicore era. H...
Guoliang Jin, Linhai Song, Wei Zhang, Shan Lu, Ben...
154
Voted
SIGMOD
2001
ACM
134views Database» more  SIGMOD 2001»
16 years 4 months ago
Preservation of Digital Data with Self-Validating, Self-Instantiating Knowledge-Based Archives
Digital archives are dedicated to the long-term preservation of electronic information and have the mandate to enable sustained access despite rapid technology changes. Persistent...
Bertram Ludäscher, Richard Marciano, Reagan Moore