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BMCBI
2004
208views more  BMCBI 2004»
14 years 11 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein
ANCS
2005
ACM
15 years 5 months ago
Fast and scalable pattern matching for content filtering
High-speed packet content inspection and filtering devices rely on a fast multi-pattern matching algorithm which is used to detect predefined keywords or signatures in the packe...
Sarang Dharmapurikar, John W. Lockwood
ISSTA
2012
ACM
13 years 2 months ago
ViewPoints: differential string analysis for discovering client- and server-side input validation inconsistencies
Since web applications are easily accessible, and often store a large amount of sensitive user information, they are a common target for attackers. In particular, attacks that foc...
Muath Alkhalaf, Shauvik Roy Choudhary, Mattia Fazz...
DCOSS
2011
Springer
13 years 11 months ago
Construction of connected dominating sets in large-scale MANETs exploiting self-stabilization
—Available algorithms for the distributed construction of connected dominating sets in mobile ad hoc networks are inapplicable or suffer from a high complexity. This is mainly du...
Stefan Unterschutz, Volker Turau
TCBB
2008
76views more  TCBB 2008»
14 years 11 months ago
Hadamard Conjugation for the Kimura 3ST Model: Combinatorial Proof Using Path Sets
Under a stochastic model of molecular sequence evolution the probability of each possible pattern of characters is well defined. The Kimura's three-substitution-types (K3ST) m...
Michael D. Hendy, Sagi Snir