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» Characterization, Stability and Convergence of Hierarchical ...
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89
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BMCBI
2008
104views more  BMCBI 2008»
14 years 11 months ago
Evolutionary Pareto-optimization of stably folding peptides
Background: As a rule, peptides are more flexible and unstructured than proteins with their substantial stabilizing hydrophobic cores. Nevertheless, a few stably folding peptides ...
Wolfram Gronwald, Tim Hohm, Daniel Hoffmann
91
Voted
INFOCOM
2006
IEEE
15 years 5 months ago
A Locating-First Approach for Scalable Overlay Multicast
— Recent proposals in multicast overlay construction have demonstrated the importance of exploiting underlying network topology. However, these topology-aware proposals often rel...
Mohamed Ali Kâafar, Thierry Turletti, Walid ...
BMCBI
2007
146views more  BMCBI 2007»
14 years 11 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
BMCBI
2005
198views more  BMCBI 2005»
14 years 11 months ago
Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
106
Voted
INFOCOM
2010
IEEE
14 years 10 months ago
Cross-layer Optimization for Wireless Networks with Deterministic Channel Models
Abstract—Existing work on cross-layer optimization for wireless networks adopts simple physical-layer models, i.e., treating interference as noise. In this paper, we adopt a dete...
Ziyu Shao, Minghua Chen, Salman Avestimehr, Shuo-Y...