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DOCENG
2005
ACM
14 years 11 months ago
Enhancing composite digital documents using XML-based standoff markup
Document representations can rapidly become unwieldy if they try to encapsulate all possible document properties, ranging tract structure to detailed rendering and layout. We pres...
Peter L. Thomas, David F. Brailsford
67
Voted
BMCBI
2007
104views more  BMCBI 2007»
14 years 9 months ago
Predicting active site residue annotations in the Pfam database
Background: Approximately 5% of Pfam families are enzymatic, but only a small fraction of the sequences within these families (<0.5%) have had the residues responsible for cata...
Jaina Mistry, Alex Bateman, Robert D. Finn
BMCBI
2010
82views more  BMCBI 2010»
14 years 9 months ago
SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
Background: Illumina's second-generation sequencing platform is playing an increasingly prominent role in modern DNA and RNA sequencing efforts. However, rapid, simple, stand...
Murray P. Cox, Daniel A. Peterson, Patrick J. Bigg...
BMCBI
2007
137views more  BMCBI 2007»
14 years 9 months ago
Bayesian refinement of protein functional site matching
Background: Matching functional sites is a key problem for the understanding of protein function and evolution. The commonly used graph theoretic approach, and other related appro...
Kanti V. Mardia, Vysaul B. Nyirongo, Peter J. Gree...
BMCBI
2008
130views more  BMCBI 2008»
14 years 9 months ago
FAF-Drugs2: Free ADME/tox filtering tool to assist drug discovery and chemical biology projects
Background: Drug discovery and chemical biology are exceedingly complex and demanding enterprises. In recent years there are been increasing awareness about the importance of pred...
David Lagorce, Olivier Sperandio, Hervé Gal...