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SIGCOMM
2010
ACM
15 years 4 months ago
Rethinking iBGP routing
The Internet is organized as a collection of administrative domains, known as Autonomous Systems (ASes). These ASes interact through the Border Gateway Protocol (BGP) that allows ...
Iuniana M. Oprescu, Mickael Meulle, Steve Uhlig, C...
BMCBI
2010
112views more  BMCBI 2010»
15 years 4 months ago
Orientation-dependent backbone-only residue pair scoring functions for fixed backbone protein design
Background: Empirical scoring functions have proven useful in protein structure modeling. Most such scoring functions depend on protein side chain conformations. However, backbone...
Andrew J. Bordner
BMCBI
2010
173views more  BMCBI 2010»
15 years 4 months ago
The Yeast Resource Center Public Image Repository: A large database of fluorescence microscopy images
Background: There is increasing interest in the development of computational methods to analyze fluorescent microscopy images and enable automated large-scale analysis of the subc...
Michael Riffle, Trisha N. Davis
BMCBI
2010
116views more  BMCBI 2010»
15 years 4 months ago
A hybrid approach to protein folding problem integrating constraint programming with local search
Background: The protein folding problem remains one of the most challenging open problems in computational biology. Simplified models in terms of lattice structure and energy func...
Abu Zafer M. Dayem Ullah, Kathleen Steinhöfel
BMCBI
2010
227views more  BMCBI 2010»
15 years 4 months ago
Accurate and efficient gp120 V3 loop structure based models for the determination of HIV-1 co-receptor usage
Background: HIV-1 targets human cells expressing both the CD4 receptor, which binds the viral envelope glycoprotein gp120, as well as either the CCR5 (R5) or CXCR4 (X4) co-recepto...
Majid Masso, Iosif I. Vaisman
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