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NAR
2008
159views more  NAR 2008»
14 years 9 months ago
The UCSC Genome Browser Database: 2008 update
The University of California, Santa Cruz, Genome Browser Database (GBD) provides integrated sequence and annotation data for a large collection of vertebrate and model organism ge...
Donna Karolchik, Robert M. Kuhn, Robert Baertsch, ...
JCPHY
2011
192views more  JCPHY 2011»
14 years 21 days ago
Fast analysis of molecular dynamics trajectories with graphics processing units - Radial distribution function histogramming
The calculation of radial distribution functions (RDFs) from molecular dynamics trajectory data is a common and computationally expensive analysis task. The rate limiting step in ...
Benjamin G. Levine, John E. Stone, Axel Kohlmeyer
CIKM
2007
Springer
15 years 4 months ago
Opinion retrieval from blogs
Opinion retrieval is a document retrieval process, which requires documents to be retrieved and ranked according to their opinions about a query topic. A relevant document must sa...
Wei Zhang, Clement T. Yu, Weiyi Meng
SDM
2008
SIAM
125views Data Mining» more  SDM 2008»
14 years 11 months ago
Mining and Ranking Generators of Sequential Patterns
Sequential pattern mining first proposed by Agrawal and Srikant has received intensive research due to its wide range applicability in many real-life domains. Various improvements...
David Lo, Siau-Cheng Khoo, Jinyan Li
BMCBI
2008
155views more  BMCBI 2008»
14 years 10 months ago
Extending pathways based on gene lists using InterPro domain signatures
Background: High-throughput technologies like functional screens and gene expression analysis produce extended lists of candidate genes. Gene-Set Enrichment Analysis is a commonly...
Florian Hahne, Alexander Mehrle, Dorit Arlt, Annem...