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» Classification of microarray data using gene networks
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BMCBI
2008
94views more  BMCBI 2008»
15 years 4 months ago
Conserved co-expression for candidate disease gene prioritization
Background: Genes that are co-expressed tend to be involved in the same biological process. However, co-expression is not a very reliable predictor of functional links between gen...
Martin Oti, Jeroen van Reeuwijk, Martijn A. Huynen...
229
Voted
ICDE
2008
IEEE
195views Database» more  ICDE 2008»
16 years 5 months ago
Scalable Rule-Based Gene Expression Data Classification
Abstract-- Current state-of-the-art association rule-based classifiers for gene expression data operate in two phases: (i) Association rule mining from training data followed by (i...
Mark A. Iwen, Willis Lang, Jignesh M. Patel
134
Voted
BMCBI
2007
138views more  BMCBI 2007»
15 years 4 months ago
A full Bayesian hierarchical mixture model for the variance of gene differential expression
Background: In many laboratory-based high throughput microarray experiments, there are very few replicates of gene expression levels. Thus, estimates of gene variances are inaccur...
Samuel O. M. Manda, Rebecca E. Walls, Mark S. Gilt...
BMCBI
2008
143views more  BMCBI 2008»
15 years 4 months ago
Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering
Background: The identification and study of proteins from metagenomic datasets can shed light on the roles and interactions of the source organisms in their communities. However, ...
Shibu Yooseph, Weizhong Li, Granger G. Sutton
CORR
2006
Springer
93views Education» more  CORR 2006»
15 years 4 months ago
Functional dissipation microarrays for classification
In this article, we describe a new method of extracting information from signals, called functional dissipation, that proves to be very effective for enhancing classification of h...
D. Napoletani, Daniele C. Struppa, T. Sauer, V. Mo...