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» Classification of microarray data using gene networks
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178
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BMCBI
2008
149views more  BMCBI 2008»
15 years 2 months ago
MD-SeeGH: a platform for integrative analysis of multi-dimensional genomic data
Background: Recent advances in global genomic profiling methodologies have enabled multidimensional characterization of biological systems. Complete analysis of these genomic prof...
Bryan Chi, Ronald J. deLeeuw, Bradley P. Coe, Raym...
167
Voted
BMCBI
2005
113views more  BMCBI 2005»
15 years 3 months ago
Systematic survey reveals general applicability of "guilt-by-association" within gene coexpression networks
Background: Biological processes are carried out by coordinated modules of interacting molecules. As clustering methods demonstrate that genes with similar expression display incr...
Cecily J. Wolfe, Isaac S. Kohane, Atul J. Butte
177
Voted
BMCBI
2010
172views more  BMCBI 2010»
14 years 10 months ago
Nonparametric identification of regulatory interactions from spatial and temporal gene expression data
Background: The correlation between the expression levels of transcription factors and their target genes can be used to infer interactions within animal regulatory networks, but ...
Anil Aswani, Soile V. E. Keränen, James Brown...
124
Voted
CMSB
2006
Springer
15 years 7 months ago
Regulatory Network Reconstruction Using Stochastic Logical Networks
Abstract. This paper presents a method for regulatory network reconstruction from experimental data. We propose a mathematical model for regulatory interactions, based on the work ...
Bartek Wilczynski, Jerzy Tiuryn
127
Voted
DMKD
1999
ACM
108views Data Mining» more  DMKD 1999»
15 years 8 months ago
Classification as Mining and Use of Labeled Itemsets
We investigate the relationship between association and classification mining. The main issue in association mining is the discovery of interesting patterns of the data, so called...
Dimitris Meretakis, Beat Wüthrich