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» Classification of microarray data using gene networks
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GECCO
2003
Springer
127views Optimization» more  GECCO 2003»
15 years 7 months ago
Complex Function Sets Improve Symbolic Discriminant Analysis of Microarray Data
Abstract. Our ability to simultaneously measure the expression levels of thousands of genes in biological samples is providing important new opportunities for improving the diagnos...
David M. Reif, Bill C. White, Nancy Olsen, Thomas ...
136
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BMCBI
2006
130views more  BMCBI 2006»
15 years 2 months ago
CARMA: A platform for analyzing microarray datasets that incorporate replicate measures
Background: The incorporation of statistical models that account for experimental variability provides a necessary framework for the interpretation of microarray data. A robust ex...
Kevin A. Greer, Matthew R. McReynolds, Heddwen L. ...
143
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BMCBI
2005
163views more  BMCBI 2005»
15 years 2 months ago
Rank-invariant resampling based estimation of false discovery rate for analysis of small sample microarray data
Background: The evaluation of statistical significance has become a critical process in identifying differentially expressed genes in microarray studies. Classical p-value adjustm...
Nitin Jain, HyungJun Cho, Michael O'Connell, Jae K...
125
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BIOINFORMATICS
2007
137views more  BIOINFORMATICS 2007»
15 years 2 months ago
Annotation-based distance measures for patient subgroup discovery in clinical microarray studies
: Background Clustering algorithms are widely used in the analysis of microarray data. In clinical studies, they are often applied to find groups of co-regulated genes. Clustering...
Claudio Lottaz, Joern Toedling, Rainer Spang
BMCBI
2008
190views more  BMCBI 2008»
15 years 2 months ago
Which missing value imputation method to use in expression profiles: a comparative study and two selection schemes
Background: Gene expression data frequently contain missing values, however, most downstream analyses for microarray experiments require complete data. In the literature many meth...
Guy N. Brock, John R. Shaffer, Richard E. Blakesle...