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BMCBI
2010
140views more  BMCBI 2010»
14 years 6 months ago
An improved machine learning protocol for the identification of correct Sequest search results
Background: Mass spectrometry has become a standard method by which the proteomic profile of cell or tissue samples is characterized. To fully take advantage of tandem mass spectr...
Morten Kallberg, Hui Lu
BMCBI
2008
140views more  BMCBI 2008»
14 years 9 months ago
FUNYBASE: a FUNgal phYlogenomic dataBASE
Background: The increasing availability of fungal genome sequences provides large numbers of proteins for evolutionary and phylogenetic analyses. However the heterogeneity of data...
Sylvain Marthey, Gabriela Aguileta, Françoi...
ENTCS
2007
168views more  ENTCS 2007»
14 years 9 months ago
Bytecode Rewriting in Tom
In this paper, we present a term rewriting based library for manipulating Java bytecode. We define a mapping from bytecode programs to algebraic terms, and we use Tom, an extensi...
Emilie Balland, Pierre-Etienne Moreau, Antoine Rei...
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BMCBI
2005
114views more  BMCBI 2005»
14 years 9 months ago
Signal transduction pathway profiling of individual tumor samples
Background: Signal transduction pathways convey information from the outside of the cell to transcription factors, which in turn regulate gene expression. Our objective is to anal...
Thomas Breslin, Morten Krogh, Carsten Peterson, Ca...
ICML
2005
IEEE
15 years 10 months ago
Large scale genomic sequence SVM classifiers
In genomic sequence analysis tasks like splice site recognition or promoter identification, large amounts of training sequences are available, and indeed needed to achieve suffici...
Bernhard Schölkopf, Gunnar Rätsch, S&oum...