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ACL
2001
14 years 11 months ago
Serial Combination of Rules and Statistics: A Case Study in Czech Tagging
A hybrid system is described which combines the strength of manual rulewriting and statistical learning, obtaining results superior to both methods if applied separately. The comb...
Jan Hajic, Pavel Krbec, Pavel Kveton, Karel Oliva,...
BMCBI
2010
189views more  BMCBI 2010»
14 years 9 months ago
High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTH
Background: Protein alignments are an essential tool for many bioinformatics analyses. While sequence alignments are accurate for proteins of high sequence similarity, they become...
Florian Teichert, Jonas Minning, Ugo Bastolla, Mar...
BIOSYSTEMS
2008
77views more  BIOSYSTEMS 2008»
14 years 9 months ago
A computational model of chemotaxis-based cell aggregation
We present a computational model that successfully captures the cell behaviors that play important roles in 2-D cell aggregation. A virtual cell in our model is designed as an ind...
Manolya Eyiyurekli, Prakash Manley, Peter I. Lelke...
BMCBI
2008
159views more  BMCBI 2008»
14 years 9 months ago
Estimation and testing for the effect of a genetic pathway on a disease outcome using logistic kernel machine regression via log
Background: Growing interest on biological pathways has called for new statistical methods for modeling and testing a genetic pathway effect on a health outcome. The fact that gen...
Dawei Liu, Debashis Ghosh, Xihong Lin
BMCBI
2006
102views more  BMCBI 2006»
14 years 9 months ago
MycoperonDB: a database of computationally identified operons and transcriptional units in Mycobacteria
Background: A key post genomics challenge is to identify how genes in an organism come together and perform physiological functions. An important first step in this direction is t...
Sarita Ranjan, Ranjit Kumar Gundu, Akash Ranjan