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» Cloud computing for comparative genomics
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RECOMB
2004
Springer
16 years 2 months ago
Estimators of Translocations and Inversions in Comparative Maps
In a comparative map, the number of translocations in the evolutionary history of a chromosome can be estimated solely on the basis of the conserved syntenies it contains. This est...
David Sankoff, Matthew Mazowita
BMCBI
2011
14 years 9 months ago
Screening synteny blocks in pairwise genome comparisons through integer programming
Background: It is difficult to accurately interpret chromosomal correspondences such as true orthology and paralogy due to significant divergence of genomes from a common ancestor...
Haibao Tang, Eric Lyons, Brent S. Pedersen, James ...
NAR
2011
233views Computer Vision» more  NAR 2011»
14 years 4 months ago
TIARA: a database for accurate analysis of multiple personal genomes based on cross-technology
High-throughput genomic technologies have been used to explore personal human genomes for the past few years. Although the integration of technologies is important for high-accura...
Dongwan Hong, Sung-Soo Park, Young Seok Ju, Sheehy...
EDBT
2009
ACM
222views Database» more  EDBT 2009»
15 years 8 months ago
Data clouds: summarizing keyword search results over structured data
Keyword searches are attractive because they facilitate users searching structured databases. On the other hand, tag clouds are popular for navigation and visualization purposes o...
Georgia Koutrika, Zahra Mohammadi Zadeh, Hector Ga...
DAM
2008
116views more  DAM 2008»
15 years 1 months ago
Expected number of breakpoints after t random reversals in genomes with duplicate genes
In comparative genomics, one wishes to deduce the evolutionary distance between dierent species by studying their genomes. Using gene order information, we seek the number of time...
Niklas Eriksen