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» Cloud computing for comparative genomics
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RECOMB
2006
Springer
16 years 1 months ago
Phylogenetic Profiling of Insertions and Deletions in Vertebrate Genomes
Micro-indels are small insertion or deletion events (indels) that occur during genome evolution. The study of micro-indels is important, both in order to better understand the unde...
Sagi Snir, Lior Pachter
106
Voted
CSB
2002
IEEE
121views Bioinformatics» more  CSB 2002»
15 years 5 months ago
Fast and Sensitive Algorithm for Aligning ESTs to Human Genome
There is a pressing need to align growing set of expressed sequence tags (ESTs) to newly sequenced human genome. The problem is, however, complicated by the exon/intron structure ...
Jun Ogasawara, Shinichi Morishita
113
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IPPS
2010
IEEE
14 years 10 months ago
pFANGS: Parallel high speed sequence mapping for Next Generation 454-roche Sequencing reads
Millions of DNA sequences (reads) are generated by Next Generation Sequencing machines everyday. There is a need for high performance algorithms to map these sequences to the refer...
Sanchit Misra, Ramanathan Narayanan, Wei-keng Liao...
110
Voted
IVC
2006
227views more  IVC 2006»
15 years 21 days ago
Automatic registration of overlapping 3D point clouds using closest points
While the SoftAssign algorithm imposes a two-way constraint embedded into the deterministic annealing scheme and the EMICP algorithm imposes a one-way constraint, they represent t...
Yonghuai Liu
123
Voted
ICCAD
2002
IEEE
98views Hardware» more  ICCAD 2002»
15 years 5 months ago
Efficient mixed-domain analysis of electrostatic MEMS
—We present efficient computational methods for scattered point and meshless analysis of electrostatic microelectromechanical systems (MEMS). Electrostatic MEM devices are govern...
Gang Li, Narayan R. Aluru